CRISPRone

CRISPRone report for GCA_003968935.1_ASM396893v1

♦ Seq 1: RXTZ01000001.1 Pseudomonas aeruginosa strain MRSN390231 MRSN390231_contig00001, whole genome shotgun sequence

⇒Summary: seq-len = 485832 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 484142-485310 bp Zoom in on locus 1 x20 CRISPR array Location: 484142-485310 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 484142-485310 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 484142-485310 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXTZ01000002.1 Pseudomonas aeruginosa strain MRSN390231 MRSN390231_contig00002, whole genome shotgun sequence

⇒Summary: seq-len = 1351350 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1308466-1318847 bp Zoom in on locus 1 x16 x15 CRISPR array Location: 1308466-1309395 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 1308466-1309395 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 1309578-1310141 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1310145-1311173 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1311184-1312167 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1312154-1313458 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 1313516-1313767 bp Gene: COG1203:cas3 Type: Type-I Location: 1313873-1316746 bp Gene: cd09718:cas1 Type: universal Location: 1316743-1317717 bp CRISPR array Location: 1317979-1318847 bp Num of repeats: 15 Spacers: s16-s29 CRISPR array Location: 1317979-1318847 bp Num of repeats: 15 Spacers: s16-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1308466-1309395 bp]: array | spacers
           [Locus range 1317979-1318847 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)