CRISPRone

CRISPRone report for GCA_003969165.1_ASM396916v1

♦ Seq 1: RXVB01000059.1 Pseudomonas aeruginosa strain MRSN1906 MRSN1906_contig00059, whole genome shotgun sequence

⇒Summary: seq-len = 7825 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-5130 bp Zoom in on locus 1 x19 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1-1263 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1250-2233 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2244-3272 bp Gene: cd09739:cas6f Type: other Location: 3276-3839 bp CRISPR array Location: 4023-5130 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 4023-5130 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4023-5130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXVB01000040.1 Pseudomonas aeruginosa strain MRSN1906 MRSN1906_contig00040, whole genome shotgun sequence

⇒Summary: seq-len = 7118 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 109-6099 bp Zoom in on locus 1 x26 Gene: COG1203:cas3 Type: Type-I Location: 109-3339 bp Gene: cd09718:cas1 Type: universal Location: 3336-4310 bp CRISPR array Location: 4572-6099 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 4572-6099 bp Num of repeats: 26 Spacers: s1-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4572-6099 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)