CRISPRone

CRISPRone report for GCA_003969265.1_ASM396926v1

♦ Seq 1: RXVE01000054.1 Pseudomonas aeruginosa strain MRSN18970 MRSN18970A_contig00054, whole genome shotgun sequence

⇒Summary: seq-len = 29436 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 35-666 bp Zoom in on locus 1 x10 CRISPR array Location: 35-666 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 35-666 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 35-666 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXVE01000019.1 Pseudomonas aeruginosa strain MRSN18970 MRSN18970A_contig00019, whole genome shotgun sequence

⇒Summary: seq-len = 995 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66-636 bp Zoom in on locus 1 x10 CRISPR array Location: 66-636 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 66-636 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 66-636 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXVE01000053.1 Pseudomonas aeruginosa strain MRSN18970 MRSN18970A_contig00053, whole genome shotgun sequence

⇒Summary: seq-len = 154295 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 145787-154263 bp Zoom in on locus 1 x11 Gene: cd09641:cas3HD Type: Type-I Location: 145787-148021 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 148072-148746 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 148743-150506 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 150518-151387 bp Gene: pfam01930:cas4 Type: Type-I Location: 151406-152038 bp Gene: cd09721:cas1 Type: universal Location: 152158-153081 bp Gene: cd09725:cas2 Type: universal Location: 153091-153381 bp CRISPR array Location: 153563-154263 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 153563-154263 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 153563-154263 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)