CRISPRone

CRISPRone report for GCA_003969495.1_ASM396949v1

♦ Seq 1: RXWB01000119.1 Pseudomonas aeruginosa strain MRSN14981 MRSN14981_contig00119, whole genome shotgun sequence

⇒Summary: seq-len = 47989 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36450-47128 bp Zoom in on locus 1 x15 x21 CRISPR array Location: 36450-37318 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 36450-37318 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 37500-38063 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38067-39095 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39106-40089 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40076-41380 bp Gene: COG1203:cas3 Type: Type-I Location: 41438-44668 bp Gene: cd09718:cas1 Type: universal Location: 44665-45639 bp CRISPR array Location: 45901-47128 bp Num of repeats: 21 Spacers: s15-s34 CRISPR array Location: 45901-47128 bp Num of repeats: 21 Spacers: s15-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36450-37318 bp]: array | spacers
           [Locus range 45901-47128 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)