CRISPRone

CRISPRone report for GCA_003969575.1_ASM396957v1

♦ Seq 1: RXUJ01000007.1 Pseudomonas aeruginosa strain MRSN30858 MRSN30858_contig00007, whole genome shotgun sequence

⇒Summary: seq-len = 39172 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14343-26625 bp Zoom in on locus 1 x33 x18 CRISPR array Location: 14343-16325 bp Num of repeats: 33 Spacers: s1-s32 CRISPR array Location: 14343-16325 bp Num of repeats: 33 Spacers: s1-s32 Gene: pfam09707:cas2 Type: universal Location: 16390-16689 bp Gene: cd09719:cas1 Type: universal Location: 16686-17576 bp Gene: pfam08798:cas6e Type: other Location: 17603-18142 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 18189-18851 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 18853-19995 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 20005-20535 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 20532-22100 bp Gene: cd09641:cas3HD Type: Type-I Location: 22103-24784 bp CRISPR array Location: 25559-26625 bp Num of repeats: 18 Spacers: s33-s49 CRISPR array Location: 25559-26625 bp Num of repeats: 18 Spacers: s33-s49 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 14343-16325 bp]: array | spacers
           [Locus range 25559-26625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)