CRISPRone

CRISPRone report for GCA_003969775.1_ASM396977v1

♦ Seq 1: RXVY01000140.1 Pseudomonas aeruginosa strain MRSN15753 MRSN15753_contig00140, whole genome shotgun sequence

⇒Summary: seq-len = 8207 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7023-7651 bp Zoom in on locus 1 x11 CRISPR array Location: 7023-7651 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 7023-7651 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 7023-7651 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXVY01000128.1 Pseudomonas aeruginosa strain MRSN15753 MRSN15753_contig00128, whole genome shotgun sequence

⇒Summary: seq-len = 49675 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38091-49120 bp Zoom in on locus 1 x14 x22 CRISPR array Location: 38091-38899 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 38091-38899 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 39082-39645 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39649-40677 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40688-41671 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41658-42959 bp Gene: COG1203:cas3 Type: Type-I Location: 43370-46600 bp Gene: cd09718:cas1 Type: universal Location: 46597-47571 bp CRISPR array Location: 47832-49120 bp Num of repeats: 22 Spacers: s14-s34 CRISPR array Location: 47832-49120 bp Num of repeats: 22 Spacers: s14-s34 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38091-38899 bp]: array | spacers
           [Locus range 47832-49120 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)