CRISPRone

CRISPRone report for GCA_003969865.1_ASM396986v1

♦ Seq 1: RXWK01000015.1 Pseudomonas aeruginosa strain MRSN12283 MRSN12283_contig00015, whole genome shotgun sequence

⇒Summary: seq-len = 229665 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182166-192548 bp Zoom in on locus 1 x18 x13 CRISPR array Location: 182166-183215 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 182166-183215 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09718:cas1 Type: universal Location: 183479-184453 bp Gene: COG1203:cas3 Type: Type-I Location: 184450-187680 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 187738-189042 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 189029-190012 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 190023-191051 bp Gene: cd09739:cas6f Type: other Location: 191055-191618 bp CRISPR array Location: 191802-192548 bp Num of repeats: 13 Spacers: s18-s29 CRISPR array Location: 191802-192548 bp Num of repeats: 13 Spacers: s18-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182166-183215 bp]: array | spacers
           [Locus range 191802-192548 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)