CRISPRone

CRISPRone report for GCA_003969875.1_ASM396987v1

♦ Seq 1: RXWJ01000089.1 Pseudomonas aeruginosa strain MRSN12365 MRSN12365_contig00089, whole genome shotgun sequence

⇒Summary: seq-len = 130867 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 78864-88725 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 78864-80474 bp Gene: pfam13280:WYL Type: other Location: 80635-81651 bp Gene: unk Type: unknown Location: 82615-82854 bp Gene: unk Type: unknown Location: 82923-83102 bp Gene: unk Type: unknown Location: 83412-83945 bp Gene: pfam13280:WYL Type: other Location: 83960-84835 bp Gene: unk Type: unknown Location: 84966-85253 bp Gene: unk Type: unknown Location: 85388-85966 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 86359-88725 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXWJ01000111.1 Pseudomonas aeruginosa strain MRSN12365 MRSN12365_contig00111, whole genome shotgun sequence

⇒Summary: seq-len = 68889 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21337-32201 bp Zoom in on locus 1 x24 x14 CRISPR array Location: 21337-22745 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 21337-22745 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 23005-23979 bp Gene: COG1203:cas3 Type: Type-I Location: 23976-27206 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27264-28568 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28555-29538 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29549-30577 bp Gene: cd09739:cas6f Type: other Location: 30581-31144 bp CRISPR array Location: 31394-32201 bp Num of repeats: 14 Spacers: s24-s36 CRISPR array Location: 31394-32201 bp Num of repeats: 14 Spacers: s24-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21337-22745 bp]: array | spacers
           [Locus range 31394-32201 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)