CRISPRone

CRISPRone report for GCA_003969965.1_ASM396996v1

♦ Seq 1: RXWR01000015.1 Pseudomonas aeruginosa strain MRSN11281 MRSN11281_contig00015, whole genome shotgun sequence

⇒Summary: seq-len = 224264 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3588-14113 bp Zoom in on locus 1 x42 CRISPR array Location: 3588-6336 bp Num of repeats: 42 Spacers: s1-s41 CRISPR array Location: 3588-6336 bp Num of repeats: 42 Spacers: s1-s41 Gene: cd09725:cas2 Type: universal Location: 6518-6808 bp Gene: cd09721:cas1 Type: universal Location: 6818-7858 bp Gene: pfam01930:cas4 Type: Type-I Location: 7862-8494 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 8513-9382 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 9394-11157 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 11154-11828 bp Gene: cd09641:cas3HD Type: Type-I Location: 11879-14113 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3588-6336 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXWR01000005.1 Pseudomonas aeruginosa strain MRSN11281 MRSN11281_contig00005, whole genome shotgun sequence

⇒Summary: seq-len = 844788 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141603-141990 bp Zoom in on locus 1 x7 CRISPR array Location: 141603-141990 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 141603-141990 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 141603-141990 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)