CRISPRone

CRISPRone report for GCA_003973805.1_ASM397380v1

♦ Seq 1: RWZL01000031.1 Pseudomonas aeruginosa strain SMC5451 IPC1620_31.1, whole genome shotgun sequence

⇒Summary: seq-len = 39276 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37779-38948 bp Zoom in on locus 1 x20 CRISPR array Location: 37779-38948 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 37779-38948 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 37779-38948 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWZL01000011.1 Pseudomonas aeruginosa strain SMC5451 IPC1620_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 217981 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208029-217679 bp Zoom in on locus 1 x11 x8 CRISPR array Location: 208029-208657 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 208029-208657 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 208908-209882 bp Gene: COG1203:cas3 Type: Type-I Location: 209879-213109 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 213167-214471 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 214458-215441 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 215452-216480 bp Gene: cd09739:cas6f Type: other Location: 216484-217047 bp CRISPR array Location: 217232-217679 bp Num of repeats: 8 Spacers: s11-s17 CRISPR array Location: 217232-217679 bp Num of repeats: 8 Spacers: s11-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 208029-208657 bp]: array | spacers
           [Locus range 217232-217679 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)