CRISPRone

CRISPRone report for GCA_003973925.1_ASM397392v1

♦ Seq 1: RXAC01000008.1 Pseudomonas aeruginosa strain HCF73 IPC1422_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 387072 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4448-14959 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 4448-5209 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 4448-5209 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 5274-5573 bp Gene: cd09719:cas1 Type: universal Location: 5570-6460 bp Gene: pfam08798:cas6e Type: other Location: 6487-7026 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 7073-7735 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 7737-8879 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 8889-9419 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 9416-10984 bp Gene: cd09641:cas3HD Type: Type-I Location: 10987-13668 bp CRISPR array Location: 14442-14959 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 14442-14959 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4448-5209 bp]: array | spacers
           [Locus range 14442-14959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)