CRISPRone

CRISPRone report for GCA_003974185.1_ASM397418v1

♦ Seq 1: RXAT01000001.1 Pseudomonas aeruginosa strain PT12 IPC1387_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 731009 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 302991-304038 bp Zoom in on locus 1 x18 CRISPR array Location: 302991-304038 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 302991-304038 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 302991-304038 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXAT01000019.1 Pseudomonas aeruginosa strain PT12 IPC1387_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 120211 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13858-22119 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 13858-16224 bp Gene: unk Type: unknown Location: 16617-17264 bp Gene: unk Type: unknown Location: 17330-17617 bp Gene: COG2378:WYL Type: other Location: 17748-18590 bp Gene: pfam13280:WYL Type: other Location: 19332-20348 bp Gene: mkCas0115:csx3 Type: other Location: 20494-22119 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)