CRISPRone

CRISPRone report for GCA_003974425.1_ASM397442v1

♦ Seq 1: RWZU01000026.1 Pseudomonas aeruginosa strain Zw64_2 IPC1436_26.1, whole genome shotgun sequence

⇒Summary: seq-len = 48072 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37755-47774 bp Zoom in on locus 1 x16 x9 CRISPR array Location: 37755-38679 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 37755-38679 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 38863-39426 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39430-40458 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40469-41452 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41439-42743 bp Gene: COG1203:cas3 Type: Type-I Location: 42801-46031 bp Gene: cd09718:cas1 Type: universal Location: 46028-47002 bp CRISPR array Location: 47267-47774 bp Num of repeats: 9 Spacers: s16-s23 CRISPR array Location: 47267-47774 bp Num of repeats: 9 Spacers: s16-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37755-38679 bp]: array | spacers
           [Locus range 47267-47774 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWZU01000005.1 Pseudomonas aeruginosa strain Zw64_2 IPC1436_5.1, whole genome shotgun sequence

⇒Summary: seq-len = 454372 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 452425-453232 bp Zoom in on locus 1 x14 CRISPR array Location: 452425-453232 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 452425-453232 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 452425-453232 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)