CRISPRone

CRISPRone report for GCA_003974455.1_ASM397445v1

♦ Seq 1: RWZW01000022.1 Pseudomonas aeruginosa strain NN5 IPC1433_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 67611 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36717-48056 bp Zoom in on locus 1 x12 x35 CRISPR array Location: 36717-37405 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36717-37405 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37588-38151 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38155-39183 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39194-40177 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40164-41468 bp Gene: COG1203:cas3 Type: Type-I Location: 41526-44756 bp Gene: cd09718:cas1 Type: universal Location: 44753-45727 bp CRISPR array Location: 45989-48056 bp Num of repeats: 35 Spacers: s12-s45 CRISPR array Location: 45989-48056 bp Num of repeats: 35 Spacers: s12-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36717-37405 bp]: array | spacers
           [Locus range 45989-48056 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)