CRISPRone

CRISPRone report for GCA_003974825.1_ASM397482v1

♦ Seq 1: RXBH01000007.1 Pseudomonas aeruginosa strain MCF149 IPC1365_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 329843 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 218614-229433 bp Zoom in on locus 1 x17 x10 CRISPR array Location: 218614-219620 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 218614-219620 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 219685-219984 bp Gene: cd09719:cas1 Type: universal Location: 219981-220871 bp Gene: pfam08798:cas6e Type: other Location: 220898-221437 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 221484-222146 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 222148-223290 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 223300-223830 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 223827-225395 bp Gene: cd09641:cas3HD Type: Type-I Location: 225398-228079 bp CRISPR array Location: 228856-229433 bp Num of repeats: 10 Spacers: s17-s25 CRISPR array Location: 228856-229433 bp Num of repeats: 10 Spacers: s17-s25 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 218614-219620 bp]: array | spacers
           [Locus range 228856-229433 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXBH01000003.1 Pseudomonas aeruginosa strain MCF149 IPC1365_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 562962 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 430045-430373 bp Zoom in on locus 1 x6 CRISPR array Location: 430045-430373 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 430045-430373 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 430045-430373 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)