CRISPRone

CRISPRone report for GCA_003974885.1_ASM397488v1

♦ Seq 1: RXBM01000001.1 Pseudomonas aeruginosa strain MCF430 IPC1360_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 928013 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 431453-433459 bp Zoom in on locus 1 x34 CRISPR array Location: 431453-433459 bp Num of repeats: 34 Spacers: s1-s33 CRISPR array Location: 431453-433459 bp Num of repeats: 34 Spacers: s1-s33 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 431453-433459 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXBM01000005.1 Pseudomonas aeruginosa strain MCF430 IPC1360_5.1, whole genome shotgun sequence

⇒Summary: seq-len = 490243 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 437577-447896 bp Zoom in on locus 1 x13 x17 CRISPR array Location: 437577-438325 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 437577-438325 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 438508-439071 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 439075-440103 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 440114-441097 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 441084-442388 bp Gene: COG1203:cas3 Type: Type-I Location: 442446-445676 bp Gene: cd09718:cas1 Type: universal Location: 445673-446647 bp CRISPR array Location: 446908-447896 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 446908-447896 bp Num of repeats: 17 Spacers: s13-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 437577-438325 bp]: array | spacers
           [Locus range 446908-447896 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)