CRISPRone

CRISPRone report for GCA_003975055.1_ASM397505v1

♦ Seq 1: RXBY01000016.1 Pseudomonas aeruginosa strain JYH7 IPC1218_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 97368 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66053-77813 bp Zoom in on locus 1 x14 x40 CRISPR array Location: 66053-66862 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 66053-66862 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 67045-67608 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 67612-68640 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 68651-69634 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 69621-70925 bp Gene: COG1203:cas3 Type: Type-I Location: 70983-74213 bp Gene: cd09718:cas1 Type: universal Location: 74210-75184 bp CRISPR array Location: 75446-77813 bp Num of repeats: 40 Spacers: s14-s52 CRISPR array Location: 75446-77813 bp Num of repeats: 40 Spacers: s14-s52 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 66053-66862 bp]: array | spacers
           [Locus range 75446-77813 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)