CRISPRone

CRISPRone report for GCA_003975575.1_ASM397557v1

♦ Seq 1: RXDX01000008.1 Pseudomonas aeruginosa strain AUS526 IPC450_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 255830 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 64344-75203 bp Zoom in on locus 1 x16 x23 CRISPR array Location: 64344-65271 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 64344-65271 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 65455-66018 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 66022-67050 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 67061-68044 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 68031-69335 bp Gene: COG1203:cas3 Type: Type-I Location: 69393-72623 bp Gene: cd09718:cas1 Type: universal Location: 72620-73594 bp CRISPR array Location: 73855-75203 bp Num of repeats: 23 Spacers: s16-s37 CRISPR array Location: 73855-75203 bp Num of repeats: 23 Spacers: s16-s37 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 64344-65271 bp]: array | spacers
           [Locus range 73855-75203 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXDX01000001.1 Pseudomonas aeruginosa strain AUS526 IPC450_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1924618 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 700166-700675 bp Zoom in on locus 1 x9 CRISPR array Location: 700166-700675 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 700166-700675 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 700166-700675 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)