CRISPRone

CRISPRone report for GCA_003975665.1_ASM397566v1

♦ Seq 1: RXEB01000011.1 Pseudomonas aeruginosa strain AUS505 IPC445_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 76937 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37759-47893 bp Zoom in on locus 1 x10 x11 CRISPR array Location: 37759-38327 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 37759-38327 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 38511-39074 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39078-40106 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40117-41100 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41087-42388 bp Gene: COG1203:cas3 Type: Type-I Location: 42799-46029 bp Gene: cd09718:cas1 Type: universal Location: 46026-47000 bp CRISPR array Location: 47265-47893 bp Num of repeats: 11 Spacers: s10-s19 CRISPR array Location: 47265-47893 bp Num of repeats: 11 Spacers: s10-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37759-38327 bp]: array | spacers
           [Locus range 47265-47893 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEB01000002.1 Pseudomonas aeruginosa strain AUS505 IPC445_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 1034629 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 319551-320118 bp Zoom in on locus 1 x10 CRISPR array Location: 319551-320118 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 319551-320118 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 319551-320118 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)