CRISPRone

CRISPRone report for GCA_003975705.1_ASM397570v1

♦ Seq 1: RXEE01000004.1 Pseudomonas aeruginosa strain AUS464 IPC432_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 646386 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 107928-109514 bp Zoom in on locus 1 x27 CRISPR array Location: 107928-109514 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 107928-109514 bp Num of repeats: 27 Spacers: s1-s26 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 107928-109514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEE01000001.1 Pseudomonas aeruginosa strain AUS464 IPC432_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 925706 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 892847-903831 bp Zoom in on locus 1 x21 x20 CRISPR array Location: 892847-894075 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 892847-894075 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 894259-894822 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 894826-895854 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 895865-896848 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 896835-898139 bp Gene: COG1203:cas3 Type: Type-I Location: 898197-901427 bp Gene: cd09718:cas1 Type: universal Location: 901424-902398 bp CRISPR array Location: 902663-903831 bp Num of repeats: 20 Spacers: s21-s39 CRISPR array Location: 902663-903831 bp Num of repeats: 20 Spacers: s21-s39 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 892847-894075 bp]: array | spacers
           [Locus range 902663-903831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)