CRISPRone

CRISPRone report for GCA_003975755.1_ASM397575v1

♦ Seq 1: RXEG01000002.1 Pseudomonas aeruginosa strain AUS177 IPC414_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 934416 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 648727-652414 bp Zoom in on locus 1 Gene: mkCas0099:csm2gr11 Type: Subtype-III-D Location: 648727-649620 bp Gene: pfam00078:RT Type: other Location: 650552-651916 bp Gene: cd09639:cas3 Type: Type-I Location: 651992-652414 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEG01000001.1 Pseudomonas aeruginosa strain AUS177 IPC414_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 939694 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 518994-528879 bp Zoom in on locus 1 x32 CRISPR array Location: 518994-521087 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 518994-521087 bp Num of repeats: 32 Spacers: s1-s31 Gene: cd09725:cas2 Type: universal Location: 521269-521559 bp Gene: cd09721:cas1 Type: universal Location: 521569-522609 bp Gene: pfam01930:cas4 Type: Type-I Location: 522613-523245 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 523264-524133 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 524130-525923 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 525920-526594 bp Gene: cd09641:cas3HD Type: Type-I Location: 526645-528879 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 518994-521087 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)