CRISPRone

CRISPRone report for GCA_003975805.1_ASM397580v1

♦ Seq 1: RXBL01000002.1 Pseudomonas aeruginosa strain MCF879 IPC1361_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 766730 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 200245-210756 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 200245-201006 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 200245-201006 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 201071-201370 bp Gene: cd09719:cas1 Type: universal Location: 201367-202257 bp Gene: pfam08798:cas6e Type: other Location: 202284-202823 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 202870-203532 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 203534-204676 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 204686-205216 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 205213-206781 bp Gene: cd09641:cas3HD Type: Type-I Location: 206784-209465 bp CRISPR array Location: 210239-210756 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 210239-210756 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 200245-201006 bp]: array | spacers
           [Locus range 210239-210756 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)