CRISPRone

CRISPRone report for GCA_003975835.1_ASM397583v1

♦ Seq 1: RXBT01000032.1 Pseudomonas aeruginosa strain JYH17 IPC1228_32.1, whole genome shotgun sequence

⇒Summary: seq-len = 22848 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21598-22286 bp Zoom in on locus 1 x12 CRISPR array Location: 21598-22286 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 21598-22286 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 21598-22286 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXBT01000019.1 Pseudomonas aeruginosa strain JYH17 IPC1228_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 94666 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2564-3251 bp Zoom in on locus 1 x12 CRISPR array Location: 2564-3251 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2564-3251 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2564-3251 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXBT01000028.1 Pseudomonas aeruginosa strain JYH17 IPC1228_28.1, whole genome shotgun sequence

⇒Summary: seq-len = 48551 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 563-10645 bp Zoom in on locus 1 x7 x19 CRISPR array Location: 563-951 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 563-951 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09718:cas1 Type: universal Location: 1215-2189 bp Gene: COG1203:cas3 Type: Type-I Location: 2186-5416 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5474-6778 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6765-7748 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7759-8787 bp Gene: cd09739:cas6f Type: other Location: 8791-9354 bp CRISPR array Location: 9538-10645 bp Num of repeats: 19 Spacers: s7-s24 CRISPR array Location: 9538-10645 bp Num of repeats: 19 Spacers: s7-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 563-951 bp]: array | spacers
           [Locus range 9538-10645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RXBT01000014.1 Pseudomonas aeruginosa strain JYH17 IPC1228_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 146231 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 75145-75593 bp Zoom in on locus 1 x8 CRISPR array Location: 75145-75593 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 75145-75593 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 75145-75593 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)