CRISPRone

CRISPRone report for GCA_003975915.1_ASM397591v1

♦ Seq 1: RXBZ01000007.1 Pseudomonas aeruginosa strain MSH10 IPC1179_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 902477 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 416741-417308 bp Zoom in on locus 1 x10 CRISPR array Location: 416741-417308 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 416741-417308 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 416741-417308 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXBZ01000001.1 Pseudomonas aeruginosa strain MSH10 IPC1179_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 954763 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 945098-954332 bp Zoom in on locus 1 x9 x3 CRISPR array Location: 945098-945605 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 945098-945605 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 945788-946351 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 946355-947383 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 947394-948377 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 948364-949668 bp Gene: COG1203:cas3 Type: Type-I Location: 949726-952956 bp Gene: cd09718:cas1 Type: universal Location: 952953-953927 bp CRISPR array Location: 954185-954332 bp Num of repeats: 3 Spacers: s9-s10 CRISPR array Location: 954185-954332 bp Num of repeats: 3 Spacers: s9-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 945098-945605 bp]: array | spacers
           [Locus range 954185-954332 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)