CRISPRone

CRISPRone report for GCA_003976185.1_ASM397618v1

♦ Seq 1: RXDE01000004.1 Pseudomonas aeruginosa strain Jp60 IPC748_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 572749 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 273177-283533 bp Zoom in on locus 1 x17 x12 CRISPR array Location: 273177-274181 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 273177-274181 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 274246-274545 bp Gene: cd09719:cas1 Type: universal Location: 274542-274853 bp Gene: pfam08798:cas6e Type: other Location: 274880-275419 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 275466-276128 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 276130-277272 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 277282-277812 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 277809-279377 bp Gene: cd09641:cas3HD Type: Type-I Location: 279380-282061 bp CRISPR array Location: 282834-283533 bp Num of repeats: 12 Spacers: s17-s27 CRISPR array Location: 282834-283533 bp Num of repeats: 12 Spacers: s17-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 273177-274181 bp]: array | spacers
           [Locus range 282834-283533 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXDE01000019.1 Pseudomonas aeruginosa strain Jp60 IPC748_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 80935 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37729-47783 bp Zoom in on locus 1 x16 x9 CRISPR array Location: 37729-38657 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 37729-38657 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 38840-39403 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39407-40435 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40446-41429 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41416-42720 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 42778-43935 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 43878-46043 bp Gene: cd09718:cas1 Type: universal Location: 46040-47014 bp CRISPR array Location: 47275-47783 bp Num of repeats: 9 Spacers: s16-s23 CRISPR array Location: 47275-47783 bp Num of repeats: 9 Spacers: s16-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37729-38657 bp]: array | spacers
           [Locus range 47275-47783 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)