CRISPRone

CRISPRone report for GCA_003976265.1_ASM397626v1

♦ Seq 1: RXDK01000016.1 Pseudomonas aeruginosa strain AMT0026-1 IPC553_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 117789 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29692-40136 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 29692-30800 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 29692-30800 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 31060-32034 bp Gene: COG1203:cas3 Type: Type-I Location: 32031-35261 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 35319-36623 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36610-37593 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37604-38632 bp Gene: cd09739:cas6f Type: other Location: 38636-39199 bp CRISPR array Location: 39449-40136 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 39449-40136 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 29692-30800 bp]: array | spacers
           [Locus range 39449-40136 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)