CRISPRone

CRISPRone report for GCA_003976455.1_ASM397645v1

♦ Seq 1: RXEQ01000005.1 Pseudomonas aeruginosa strain AUS311 IPC381_5.1, whole genome shotgun sequence

⇒Summary: seq-len = 313467 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 312565-312952 bp Zoom in on locus 1 x7 CRISPR array Location: 312565-312952 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 312565-312952 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 312565-312952 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEQ01000001.1 Pseudomonas aeruginosa strain AUS311 IPC381_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1155868 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 707740-717972 bp Zoom in on locus 1 x9 x9 CRISPR array Location: 707740-708256 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 707740-708256 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09755:cas2 Type: universal Location: 708321-708497 bp Gene: cd09719:cas1 Type: universal Location: 708582-709472 bp Gene: pfam08798:cas6e Type: other Location: 709499-710038 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 710085-710747 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 710749-711891 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 711901-712431 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 712428-713996 bp Gene: cd09641:cas3HD Type: Type-I Location: 713999-716680 bp CRISPR array Location: 717456-717972 bp Num of repeats: 9 Spacers: s9-s16 CRISPR array Location: 717456-717972 bp Num of repeats: 9 Spacers: s9-s16 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 707740-708256 bp]: array | spacers
           [Locus range 717456-717972 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)