CRISPRone

CRISPRone report for GCA_003976645.1_ASM397664v1

♦ Seq 1: RXFC01000001.1 Pseudomonas aeruginosa strain AUS452 IPC270_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 928840 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208287-209214 bp Zoom in on locus 1 x16 CRISPR array Location: 208287-209214 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 208287-209214 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208287-209214 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXFC01000015.1 Pseudomonas aeruginosa strain AUS452 IPC270_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 82868 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34713-44783 bp Zoom in on locus 1 x11 x9 CRISPR array Location: 34713-35341 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 34713-35341 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 35601-36575 bp Gene: COG1203:cas3 Type: Type-I Location: 36572-39802 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40213-41514 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41501-42484 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 42495-43523 bp Gene: cd09739:cas6f Type: other Location: 43527-44090 bp CRISPR array Location: 44275-44783 bp Num of repeats: 9 Spacers: s11-s18 CRISPR array Location: 44275-44783 bp Num of repeats: 9 Spacers: s11-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34713-35341 bp]: array | spacers
           [Locus range 44275-44783 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)