CRISPRone

CRISPRone report for GCA_003976665.1_ASM397666v1

♦ Seq 1: RXFE01000001.1 Pseudomonas aeruginosa strain AUS226 IPC252_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 731507 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208680-210147 bp Zoom in on locus 1 x25 CRISPR array Location: 208680-210147 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 208680-210147 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208680-210147 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXFE01000003.1 Pseudomonas aeruginosa strain AUS226 IPC252_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 600122 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 552092-554294 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 552092-552499 bp Gene: unk Type: unknown Location: 552527-553213 bp Gene: COG2378:WYL Type: other Location: 553323-554294 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXFE01000019.1 Pseudomonas aeruginosa strain AUS226 IPC252_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 69314 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19746-30355 bp Zoom in on locus 1 x10 x18 CRISPR array Location: 19746-20314 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 19746-20314 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 20575-21549 bp Gene: COG1203:cas3 Type: Type-I Location: 21546-24776 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 25187-26488 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26475-27458 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27469-28497 bp Gene: cd09739:cas6f Type: other Location: 28501-29064 bp CRISPR array Location: 29307-30355 bp Num of repeats: 18 Spacers: s10-s26 CRISPR array Location: 29307-30355 bp Num of repeats: 18 Spacers: s10-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 19746-20314 bp]: array | spacers
           [Locus range 29307-30355 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)