CRISPRone

CRISPRone report for GCA_003976685.1_ASM397668v1

♦ Seq 1: RXFG01000009.1 Pseudomonas aeruginosa strain AUS222 IPC247_9.1, whole genome shotgun sequence

⇒Summary: seq-len = 299816 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 293954-299344 bp Zoom in on locus 1 x16 CRISPR array Location: 293954-294883 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 293954-294883 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 295143-296117 bp Gene: COG1203:cas3 Type: Type-I Location: 296114-299344 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 293954-294883 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXFG01000001.1 Pseudomonas aeruginosa strain AUS222 IPC247_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 916272 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 419800-420428 bp Zoom in on locus 1 x11 CRISPR array Location: 419800-420428 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 419800-420428 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 419800-420428 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXFG01000019.1 Pseudomonas aeruginosa strain AUS222 IPC247_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 44726 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 535-6121 bp Zoom in on locus 1 x26 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 535-1836 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1823-2806 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2817-3845 bp Gene: cd09739:cas6f Type: other Location: 3849-4412 bp CRISPR array Location: 4597-6121 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 4597-6121 bp Num of repeats: 26 Spacers: s1-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4597-6121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)