CRISPRone

CRISPRone report for GCA_003976765.1_ASM397676v1

♦ Seq 1: RXEI01000015.1 Pseudomonas aeruginosa strain AUS175 IPC412_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 128201 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 87570-97770 bp Zoom in on locus 1 x11 x17 CRISPR array Location: 87570-88199 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 87570-88199 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09739:cas6f Type: other Location: 88382-88945 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 88949-89977 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 89988-90971 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 90958-92262 bp Gene: COG1203:cas3 Type: Type-I Location: 92320-95550 bp Gene: cd09718:cas1 Type: universal Location: 95547-96521 bp CRISPR array Location: 96783-97770 bp Num of repeats: 17 Spacers: s11-s26 CRISPR array Location: 96783-97770 bp Num of repeats: 17 Spacers: s11-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 87570-88199 bp]: array | spacers
           [Locus range 96783-97770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)