CRISPRone

CRISPRone report for GCA_003976775.1_ASM397677v1

♦ Seq 1: RXEJ01000017.1 Pseudomonas aeruginosa strain AUS174 IPC411_17.1, whole genome shotgun sequence

⇒Summary: seq-len = 48931 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304-10259 bp Zoom in on locus 1 x8 x16 CRISPR array Location: 304-752 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 304-752 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09718:cas1 Type: universal Location: 1009-1983 bp Gene: COG1203:cas3 Type: Type-I Location: 1980-5210 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5268-6572 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6559-7542 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7553-8581 bp Gene: cd09739:cas6f Type: other Location: 8585-9148 bp CRISPR array Location: 9332-10259 bp Num of repeats: 16 Spacers: s8-s22 CRISPR array Location: 9332-10259 bp Num of repeats: 16 Spacers: s8-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 304-752 bp]: array | spacers
           [Locus range 9332-10259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEJ01000006.1 Pseudomonas aeruginosa strain AUS174 IPC411_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 408643 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 407593-408340 bp Zoom in on locus 1 x13 CRISPR array Location: 407593-408340 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 407593-408340 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 407593-408340 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)