CRISPRone

CRISPRone report for GCA_003976845.1_ASM397684v1

♦ Seq 1: RXEY01000018.1 Pseudomonas aeruginosa strain AUS265 IPC325_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 73435 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37693-47891 bp Zoom in on locus 1 x21 x7 CRISPR array Location: 37693-38921 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 37693-38921 bp Num of repeats: 21 Spacers: s1-s20 Gene: pfam09618:cas6f Type: Subtype-I-F Location: 39104-39667 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39671-40699 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40710-41693 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41680-42984 bp Gene: COG1203:cas3 Type: Type-I Location: 43042-46272 bp Gene: cd09718:cas1 Type: universal Location: 46269-47243 bp CRISPR array Location: 47504-47891 bp Num of repeats: 7 Spacers: s21-s26 CRISPR array Location: 47504-47891 bp Num of repeats: 7 Spacers: s21-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37693-38921 bp]: array | spacers
           [Locus range 47504-47891 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEY01000004.1 Pseudomonas aeruginosa strain AUS265 IPC325_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 599747 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 112330-112837 bp Zoom in on locus 1 x9 CRISPR array Location: 112330-112837 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 112330-112837 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 112330-112837 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)