CRISPRone

CRISPRone report for GCA_003976855.1_ASM397685v1

♦ Seq 1: RXES01000015.1 Pseudomonas aeruginosa strain AUS136 IPC377_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 70228 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37793-48291 bp Zoom in on locus 1 x17 x16 CRISPR array Location: 37793-38781 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 37793-38781 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 38963-39526 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39530-40558 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40569-41552 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41539-42843 bp Gene: COG1203:cas3 Type: Type-I Location: 42901-46131 bp Gene: cd09718:cas1 Type: universal Location: 46128-47102 bp CRISPR array Location: 47364-48291 bp Num of repeats: 16 Spacers: s17-s31 CRISPR array Location: 47364-48291 bp Num of repeats: 16 Spacers: s17-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37793-38781 bp]: array | spacers
           [Locus range 47364-48291 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)