CRISPRone

CRISPRone report for GCA_003976865.1_ASM397686v1

♦ Seq 1: RXEW01000018.1 Pseudomonas aeruginosa strain AUS110 IPC357_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 78047 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37894-48094 bp Zoom in on locus 1 x11 x17 CRISPR array Location: 37894-38523 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 37894-38523 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09739:cas6f Type: other Location: 38706-39269 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39273-40301 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40312-41295 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41282-42586 bp Gene: COG1203:cas3 Type: Type-I Location: 42644-45874 bp Gene: cd09718:cas1 Type: universal Location: 45871-46845 bp CRISPR array Location: 47107-48094 bp Num of repeats: 17 Spacers: s11-s26 CRISPR array Location: 47107-48094 bp Num of repeats: 17 Spacers: s11-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37894-38523 bp]: array | spacers
           [Locus range 47107-48094 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)