CRISPRone

CRISPRone report for GCA_003976905.1_ASM397690v1

♦ Seq 1: RXEZ01000019.1 Pseudomonas aeruginosa strain AUS527 IPC324_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 113647 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 575-1323 bp Zoom in on locus 1 x13 CRISPR array Location: 575-1323 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 575-1323 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 575-1323 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXEZ01000022.1 Pseudomonas aeruginosa strain AUS527 IPC324_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 70731 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21545-32450 bp Zoom in on locus 1 x17 x17 CRISPR array Location: 21545-22534 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 21545-22534 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09718:cas1 Type: universal Location: 22791-23762 bp Gene: COG1203:cas3 Type: Type-I Location: 23759-26989 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27400-28701 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28688-29671 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29682-30710 bp Gene: cd09739:cas6f Type: other Location: 30714-31277 bp CRISPR array Location: 31462-32450 bp Num of repeats: 17 Spacers: s17-s32 CRISPR array Location: 31462-32450 bp Num of repeats: 17 Spacers: s17-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21545-22534 bp]: array | spacers
           [Locus range 31462-32450 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)