CRISPRone

CRISPRone report for GCA_004053845.1_ASM405384v1

♦ Seq 1: SBJW01000008.1 Pseudomonas aeruginosa strain Pae42, whole genome shotgun sequence

⇒Summary: seq-len = 242178 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59152-69821 bp Zoom in on locus 1 x15 x21 CRISPR array Location: 59152-60020 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 59152-60020 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 60203-60766 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 60770-61798 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 61809-62792 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 62779-64083 bp Gene: COG1203:cas3 Type: Type-I Location: 64141-67371 bp Gene: cd09718:cas1 Type: universal Location: 67368-68342 bp CRISPR array Location: 68594-69821 bp Num of repeats: 21 Spacers: s15-s34 CRISPR array Location: 68594-69821 bp Num of repeats: 21 Spacers: s15-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 59152-60020 bp]: array | spacers
           [Locus range 68594-69821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SBJW01000003.1 Pseudomonas aeruginosa strain Pae42, whole genome shotgun sequence

⇒Summary: seq-len = 404491 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 313379-313707 bp Zoom in on locus 1 x6 CRISPR array Location: 313379-313707 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 313379-313707 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 313379-313707 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)