CRISPRone

CRISPRone report for GCA_004053865.1_ASM405386v1

♦ Seq 1: SBKA01000004.1 Pseudomonas aeruginosa strain Pae81, whole genome shotgun sequence

⇒Summary: seq-len = 441079 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 126918-137736 bp Zoom in on locus 1 x11 x16 CRISPR array Location: 126918-127558 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 126918-127558 bp Num of repeats: 11 Spacers: s1-s10 Gene: pfam09707:cas2 Type: universal Location: 127623-127922 bp Gene: cd09719:cas1 Type: universal Location: 127919-128809 bp Gene: pfam08798:cas6e Type: other Location: 128836-129375 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 129422-130084 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 130086-131228 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 131238-131768 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 131765-133333 bp Gene: cd09641:cas3HD Type: Type-I Location: 133336-136017 bp CRISPR array Location: 136793-137736 bp Num of repeats: 16 Spacers: s11-s25 CRISPR array Location: 136793-137736 bp Num of repeats: 16 Spacers: s11-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 126918-127558 bp]: array | spacers
           [Locus range 136793-137736 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)