CRISPRone

CRISPRone report for GCA_004053955.1_ASM405395v1

♦ Seq 1: SBJU01000001.1 Pseudomonas aeruginosa strain Pae29, whole genome shotgun sequence

⇒Summary: seq-len = 512859 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 421747-422075 bp Zoom in on locus 1 x6 CRISPR array Location: 421747-422075 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 421747-422075 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 421747-422075 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SBJU01000010.1 Pseudomonas aeruginosa strain Pae29, whole genome shotgun sequence

⇒Summary: seq-len = 243732 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 60697-71366 bp Zoom in on locus 1 x15 x21 CRISPR array Location: 60697-61565 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 60697-61565 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 61748-62311 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 62315-63343 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 63354-64337 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 64324-65628 bp Gene: COG1203:cas3 Type: Type-I Location: 65686-68916 bp Gene: cd09718:cas1 Type: universal Location: 68913-69887 bp CRISPR array Location: 70139-71366 bp Num of repeats: 21 Spacers: s15-s34 CRISPR array Location: 70139-71366 bp Num of repeats: 21 Spacers: s15-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 60697-61565 bp]: array | spacers
           [Locus range 70139-71366 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)