CRISPRone

CRISPRone report for GCA_004053985.1_ASM405398v1

♦ Seq 1: SBJY01000017.1 Pseudomonas aeruginosa strain Pae70, whole genome shotgun sequence

⇒Summary: seq-len = 101207 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43-492 bp Zoom in on locus 1 x8 CRISPR array Location: 43-492 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 43-492 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 43-492 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SBJY01000183.1 Pseudomonas aeruginosa strain Pae70, whole genome shotgun sequence

⇒Summary: seq-len = 831 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 91-842 bp Zoom in on locus 1 x13 CRISPR array Location: 91-842 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 91-842 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 91-842 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SBJY01000083.1 Pseudomonas aeruginosa strain Pae70, whole genome shotgun sequence

⇒Summary: seq-len = 9739 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 200-9649 bp Zoom in on locus 1 x18 Gene: cd09739:cas6f Type: other Location: 200-763 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 767-1795 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1806-2789 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2776-4080 bp Gene: COG1203:cas3 Type: Type-I Location: 4138-7368 bp Gene: cd09718:cas1 Type: universal Location: 7365-8339 bp CRISPR array Location: 8600-9649 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 8600-9649 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8600-9649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SBJY01000203.1 Pseudomonas aeruginosa strain Pae70, whole genome shotgun sequence

⇒Summary: seq-len = 572 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 35-482 bp Zoom in on locus 1 x8 CRISPR array Location: 35-482 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 35-482 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 35-482 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SBJY01000156.1 Pseudomonas aeruginosa strain Pae70, whole genome shotgun sequence

⇒Summary: seq-len = 1363 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 91-1380 bp Zoom in on locus 1 x22 CRISPR array Location: 91-1380 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 91-1380 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 91-1380 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SBJY01000194.1 Pseudomonas aeruginosa strain Pae70, whole genome shotgun sequence

⇒Summary: seq-len = 659 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161-670 bp Zoom in on locus 1 x9 CRISPR array Location: 161-670 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 161-670 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 161-670 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)