CRISPRone

CRISPRone report for GCA_004123345.1_ASM412334v1

♦ Seq 1: SDVE01000045.1 Pseudomonas aeruginosa strain M67 NODE_45_length_44718_cov_30.0768, whole genome shotgun sequence

⇒Summary: seq-len = 44718 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28110-38744 bp Zoom in on locus 1 x19 x5 CRISPR array Location: 28110-29236 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 28110-29236 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 29301-29600 bp Gene: cd09719:cas1 Type: universal Location: 29597-30487 bp Gene: pfam08798:cas6e Type: other Location: 30514-31053 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 31100-31762 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 31764-32906 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 32916-33446 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 33443-35011 bp Gene: cd09641:cas3HD Type: Type-I Location: 35014-37695 bp CRISPR array Location: 38472-38744 bp Num of repeats: 5 Spacers: s19-s22 CRISPR array Location: 38472-38744 bp Num of repeats: 5 Spacers: s19-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28110-29236 bp]: array | spacers
           [Locus range 38472-38744 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)