CRISPRone

CRISPRone report for GCA_004123565.1_ASM412356v1

♦ Seq 1: SDVG01000053.1 Pseudomonas aeruginosa strain M64 NODE_53_length_44044_cov_19.6743, whole genome shotgun sequence

⇒Summary: seq-len = 44044 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27655-38289 bp Zoom in on locus 1 x19 x5 CRISPR array Location: 27655-28781 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 27655-28781 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 28846-29145 bp Gene: cd09719:cas1 Type: universal Location: 29142-30032 bp Gene: pfam08798:cas6e Type: other Location: 30059-30598 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 30645-31307 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 31309-32451 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 32461-32991 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 32988-34556 bp Gene: cd09641:cas3HD Type: Type-I Location: 34559-37240 bp CRISPR array Location: 38017-38289 bp Num of repeats: 5 Spacers: s19-s22 CRISPR array Location: 38017-38289 bp Num of repeats: 5 Spacers: s19-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27655-28781 bp]: array | spacers
           [Locus range 38017-38289 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)