CRISPRone

CRISPRone report for GCA_004145785.1_ASM414578v1

♦ Seq 1: SELC01000012.1 Pseudomonas aeruginosa strain CCBH5698 scaffold12.1, whole genome shotgun sequence

⇒Summary: seq-len = 161538 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149703-158767 bp Zoom in on locus 1 x40 CRISPR array Location: 149703-152322 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 149703-152322 bp Num of repeats: 40 Spacers: s1-s39 Gene: cd09725:cas2 Type: universal Location: 152504-152794 bp Gene: cd09721:cas1 Type: universal Location: 152804-153844 bp Gene: pfam01930:cas4 Type: Type-I Location: 153848-154480 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 154499-155368 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 155365-157158 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 157155-157829 bp Gene: COG1203:cas3 Type: Type-I Location: 157880-158767 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 149703-152322 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)