CRISPRone

CRISPRone report for GCA_004146325.1_ASM414632v1

♦ Seq 1: SELB01000043.1 Pseudomonas aeruginosa strain CCBH18249 scaffold43.1, whole genome shotgun sequence

⇒Summary: seq-len = 46602 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37024-46290 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 37024-37398 bp CRISPR array Location: 37226-39845 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 37226-39845 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 37441-38478 bp Gene: unk Type: unknown Location: 39298-39810 bp Gene: cd09725:cas2 Type: universal Location: 40027-40317 bp Gene: cd09721:cas1 Type: universal Location: 40327-41367 bp Gene: pfam01930:cas4 Type: Type-I Location: 41371-42003 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 42022-42891 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 42888-44681 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 44678-45352 bp Gene: COG1203:cas3 Type: Type-I Location: 45403-46290 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37226-39845 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)