CRISPRone

CRISPRone report for GCA_004152855.1_ASM415285v1

♦ Seq 1: SEMF01000033.1 Pseudomonas aeruginosa strain CCBH4850 scaffold33.1, whole genome shotgun sequence

⇒Summary: seq-len = 55877 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36961-47574 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 36961-37335 bp CRISPR array Location: 37163-39782 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 37163-39782 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 37378-38415 bp Gene: unk Type: unknown Location: 39235-39747 bp Gene: cd09725:cas2 Type: universal Location: 39964-40254 bp Gene: cd09721:cas1 Type: universal Location: 40264-41304 bp Gene: pfam01930:cas4 Type: Type-I Location: 41308-41940 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 41959-42828 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 42825-44618 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 44615-45289 bp Gene: cd09641:cas3HD Type: Type-I Location: 45340-47574 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37163-39782 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)