CRISPRone

CRISPRone report for GCA_004167855.1_ASM416785v1

♦ Seq 1: RCXN01000001.1 Bacteroides fragilis strain am_0171 Scaffold_0001, whole genome shotgun sequence

⇒Summary: seq-len = 1066996 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 693656-708302 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 693656-694387 bp Gene: unk Type: unknown Location: 694405-695031 bp Gene: unk Type: unknown Location: 695007-695786 bp Gene: cash17:cash17 Type: Type- Location: 695831-697258 bp Gene: unk Type: unknown Location: 697255-697734 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 697748-699157 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 699162-700964 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 700957-702096 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 702116-702955 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 702968-703378 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 703375-704325 bp Gene: cd09634:cas1 Type: universal Location: 704345-706615 bp Gene: cd09725:cas2 Type: universal Location: 706609-706899 bp CRISPR array Location: 707347-708302 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 707347-708302 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 707347-708302 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RCXN01000003.1 Bacteroides fragilis strain am_0171 Scaffold_0003, whole genome shotgun sequence

⇒Summary: seq-len = 525073 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144450-148063 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 144450-145118 bp Gene: unk Type: unknown Location: 145121-145894 bp Gene: unk Type: unknown Location: 145902-147167 bp Gene: pfam13280:WYL Type: other Location: 147164-148063 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)