CRISPRone

CRISPRone report for GCA_004314305.1_ASM431430v1

♦ Seq 1: BIOA01000263.1 Clostridioides difficile FD034 DNA, sequence263, whole genome shotgun sequence

⇒Summary: seq-len = 4688 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIOA01000124.1 Clostridioides difficile FD034 DNA, sequence124, whole genome shotgun sequence

⇒Summary: seq-len = 10653 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 547-2223 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIOA01000055.1 Clostridioides difficile FD034 DNA, sequence055, whole genome shotgun sequence

⇒Summary: seq-len = 19981 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33-128 bp]: array | spacers
           [Locus range 2772-3132 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIOA01000324.1 Clostridioides difficile FD034 DNA, sequence324, whole genome shotgun sequence

⇒Summary: seq-len = 3324 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2847-3334 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIOA01000126.1 Clostridioides difficile FD034 DNA, sequence126, whole genome shotgun sequence

⇒Summary: seq-len = 10557 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1649-1744 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIOA01000011.1 Clostridioides difficile FD034 DNA, sequence011, whole genome shotgun sequence

⇒Summary: seq-len = 38320 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5135-5424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIOA01000157.1 Clostridioides difficile FD034 DNA, sequence157, whole genome shotgun sequence

⇒Summary: seq-len = 9156 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8941-9168 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: BIOA01000374.1 Clostridioides difficile FD034 DNA, sequence374, whole genome shotgun sequence

⇒Summary: seq-len = 2003 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1183-2006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: BIOA01000099.1 Clostridioides difficile FD034 DNA, sequence099, whole genome shotgun sequence

⇒Summary: seq-len = 13233 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: BIOA01000322.1 Clostridioides difficile FD034 DNA, sequence322, whole genome shotgun sequence

⇒Summary: seq-len = 3340 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1036-1263 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: BIOA01000123.1 Clostridioides difficile FD034 DNA, sequence123, whole genome shotgun sequence

⇒Summary: seq-len = 10692 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5693-6115 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: BIOA01000247.1 Clostridioides difficile FD034 DNA, sequence247, whole genome shotgun sequence

⇒Summary: seq-len = 5296 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2683-3167 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: BIOA01000255.1 Clostridioides difficile FD034 DNA, sequence255, whole genome shotgun sequence

⇒Summary: seq-len = 4918 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3386-3946 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)