CRISPRone

CRISPRone report for GCA_004314905.1_ASM431490v1

♦ Seq 1: BIPE01000223.1 Clostridioides difficile FD065 DNA, sequence223, whole genome shotgun sequence

⇒Summary: seq-len = 1261 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1045-1270 bp Zoom in on locus 1 x4 CRISPR array Location: 1045-1270 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1045-1270 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1045-1270 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIPE01000175.1 Clostridioides difficile FD065 DNA, sequence175, whole genome shotgun sequence

⇒Summary: seq-len = 3579 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3221-3580 bp Zoom in on locus 1 x6 CRISPR array Location: 3221-3580 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 3221-3580 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3221-3580 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIPE01000116.1 Clostridioides difficile FD065 DNA, sequence116, whole genome shotgun sequence

⇒Summary: seq-len = 11467 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4996-5157 bp Zoom in on locus 1 x3 CRISPR array Location: 4996-5157 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 4996-5157 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4996-5157 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIPE01000014.1 Clostridioides difficile FD065 DNA, sequence014, whole genome shotgun sequence

⇒Summary: seq-len = 55607 bp; # of CRISPR array = 0; # of cas gene = 7  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12265-21988 bp Zoom in on locus 1 Gene: mkCas0101:csm2gr11 Type: Subtype-III-D Location: 12265-13374 bp Gene: cas14:cas14 Type: Type-V Location: 13527-14699 bp Gene: unk Type: unknown Location: 14727-15185 bp Gene: pfam01881:cas6 Type: other Location: 15499-16236 bp Gene: pfam09706:cas8b2 Type: Subtype-I-B Location: 16241-17707 bp Gene: cd09687:cas7 Type: Subtype-I-B Location: 17727-18740 bp Gene: cd09693:cas5 Type: Type-I Location: 18756-19553 bp Gene: cd09641:cas3HD Type: Type-I Location: 19580-21988 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIPE01000128.1 Clostridioides difficile FD065 DNA, sequence128, whole genome shotgun sequence

⇒Summary: seq-len = 7930 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 470-565 bp Zoom in on locus 1 x2 CRISPR array Location: 470-565 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 470-565 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 470-565 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIPE01000101.1 Clostridioides difficile FD065 DNA, sequence101, whole genome shotgun sequence

⇒Summary: seq-len = 13792 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10431-10788 bp Zoom in on locus 1 x6 CRISPR array Location: 10431-10788 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 10431-10788 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 10431-10788 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)