CRISPRone

CRISPRone report for GCA_004315345.1_ASM431534v1

♦ Seq 1: BIQA01000016.1 Clostridioides difficile FD090 DNA, sequence016, whole genome shotgun sequence

⇒Summary: seq-len = 67740 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25267-25556 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIQA01000100.1 Clostridioides difficile FD090 DNA, sequence100, whole genome shotgun sequence

⇒Summary: seq-len = 7876 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5373-6790 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIQA01000003.1 Clostridioides difficile FD090 DNA, sequence003, whole genome shotgun sequence

⇒Summary: seq-len = 143057 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 76709-78385 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIQA01000096.1 Clostridioides difficile FD090 DNA, sequence096, whole genome shotgun sequence

⇒Summary: seq-len = 9716 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1591-1818 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIQA01000026.1 Clostridioides difficile FD090 DNA, sequence026, whole genome shotgun sequence

⇒Summary: seq-len = 48079 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42590-43013 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIQA01000004.1 Clostridioides difficile FD090 DNA, sequence004, whole genome shotgun sequence

⇒Summary: seq-len = 128431 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 58860-59153 bp]: array | spacers
           [Locus range 83063-83424 bp]: array | spacers
           [Locus range 86067-86360 bp]: array | spacers
           [Locus range 88771-88866 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIQA01000002.1 Clostridioides difficile FD090 DNA, sequence002, whole genome shotgun sequence

⇒Summary: seq-len = 154240 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120137-120696 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: BIQA01000031.1 Clostridioides difficile FD090 DNA, sequence031, whole genome shotgun sequence

⇒Summary: seq-len = 44481 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35709-36192 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: BIQA01000022.1 Clostridioides difficile FD090 DNA, sequence022, whole genome shotgun sequence

⇒Summary: seq-len = 57307 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38462-39015 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: BIQA01000015.1 Clostridioides difficile FD090 DNA, sequence015, whole genome shotgun sequence

⇒Summary: seq-len = 73726 bp; # of CRISPR array = 0; # of cas gene = 7  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)