CRISPRone

CRISPRone report for GCA_004317505.1_ASM431750v1

♦ Seq 1: BIUE01000129.1 Clostridioides difficile FD210 DNA, sequence129, whole genome shotgun sequence

⇒Summary: seq-len = 10684 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10334-10695 bp Zoom in on locus 1 x6 CRISPR array Location: 10334-10695 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 10334-10695 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 10334-10695 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIUE01000045.1 Clostridioides difficile FD210 DNA, sequence045, whole genome shotgun sequence

⇒Summary: seq-len = 26896 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23572-23929 bp Zoom in on locus 1 x6 CRISPR array Location: 23572-23929 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 23572-23929 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 23572-23929 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIUE01000250.1 Clostridioides difficile FD210 DNA, sequence250, whole genome shotgun sequence

⇒Summary: seq-len = 2521 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 398-493 bp Zoom in on locus 1 x2 CRISPR array Location: 398-493 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 398-493 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 398-493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIUE01000054.1 Clostridioides difficile FD210 DNA, sequence054, whole genome shotgun sequence

⇒Summary: seq-len = 24465 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20972-21591 bp Zoom in on locus 1 x10 CRISPR array Location: 20972-21591 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 20972-21591 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 20972-21591 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIUE01000049.1 Clostridioides difficile FD210 DNA, sequence049, whole genome shotgun sequence

⇒Summary: seq-len = 25371 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16790-17279 bp Zoom in on locus 1 x8 CRISPR array Location: 16790-17279 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 16790-17279 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16790-17279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIUE01000015.1 Clostridioides difficile FD210 DNA, sequence015, whole genome shotgun sequence

⇒Summary: seq-len = 44320 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1536-1697 bp Zoom in on locus 1 x3 CRISPR array Location: 1536-1697 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 1536-1697 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1536-1697 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIUE01000055.1 Clostridioides difficile FD210 DNA, sequence055, whole genome shotgun sequence

⇒Summary: seq-len = 24269 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17717-24206 bp Zoom in on locus 1 Gene: cd09641:cas3HD Type: Type-I Location: 17717-20125 bp Gene: cd09693:cas5 Type: Type-I Location: 20152-20949 bp Gene: cd09687:cas7 Type: Subtype-I-B Location: 20965-21978 bp Gene: pfam09706:cas8b2 Type: Subtype-I-B Location: 21998-23464 bp Gene: pfam01881:cas6 Type: other Location: 23469-24206 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)